Summary Statistics
| Mouse | Human |
| Total proteins |
58128
|
64637 |
| Total TUs |
29682 |
26583 |
| Experimental SCL |
2068
|
|
| Literature SCL |
9268 |
6900 |
| Other SCL |
14659 |
17666 |
| Any SCL |
20766 |
21349 |
| Predicted motif data |
30583 |
31198 |
| Ortholog TUs |
10102 |
10102 |
|
Membrane Organization
|
| |
Mouse
|
Human
|
|
Soluble Proteins
|
44040 |
50029 |
| Secreted |
4231 |
4418 |
| Cytoplasmic |
39809 |
45611 |
|
Membrane Proteins
|
14088 |
14608 |
| Type I |
2038 |
2350 |
| Type II |
4687 |
5221 |
| Multipass |
7363 |
7037 |
|
LOCATE is a curated database that houses data describing the membrane
organization and subcellular localization of proteins from the RIKEN FANTOM4
mouse and human protein sequence set. The membrane organization is predicted by the
high-throughput, computational pipeline MemO. The subcellular locations were
determined by a high-throughput, immunofluorescence-based assay and by manually
reviewing peer-reviewed publications.
If you are aware of published protein subcellular localization data that is not currently included in LOCATE, please contribute your information.
|
|
